SS-31: alternating aromatic and basic residues

Four residues, two of which do not appear in any protein, arranged in a deliberate alternating pattern. As with Ipamorelin, a mass calculated from a standard table will be wrong — and here the reason is structural rather than incidental.

Research-use scope. This page describes a laboratory research material and its analytical documentation. It is not for use in people or animals, contains no handling, preparation, or procedural guidance, and makes no claim that this material is safe or effective for any purpose. SS-31 is supplied here for laboratory research only.

What it is

SS-31, also called elamipretide, is a tetrapeptide designed around a specific structural pattern: alternating basic and aromatic residues. The sequence is D-arginine, dimethyltyrosine, lysine, phenylalanine, with a C-terminal amide.

Two of those four are not standard protein residues. D-arginine is the mirror image of the natural form, and 2,6-dimethyltyrosine carries two methyl groups on its aromatic ring that ordinary tyrosine does not have.

PropertyValueWhere it is confirmed
Residue count4 (D-Arg, Dmt, Lys, Phe-NH2)Synthesis record
Approximate massnear 640 g/molCertificate of analysis
Non-standard residuesD-arginine; 2,6-dimethyltyrosineSynthesis record
C-terminusAmideSynthesis record; identity result
Physical form suppliedLyophilized solidLabel and batch record

Why a standard table gives the wrong answer

Anyone computing this compound's mass from a table of the twenty protein amino acids will be wrong twice over. Dimethyltyrosine is about 28 units heavier than tyrosine — two methyl groups — and it is not in any standard table, so a calculator will either substitute plain tyrosine or fail silently. The C-terminal amide subtracts about one further unit relative to a free acid.

The rule established under Ipamorelin applies with full force: for a modified peptide, the calculated mass on the report is the reference, and the stated molecular formula is what makes it interpretable. A disagreement with your own arithmetic is usually a fact about the arithmetic.

What the D-residue hides, and what catches it

D-arginine has exactly the same mass as L-arginine. If the wrong stereoisomer were incorporated, no mass measurement would object — the molecule would weigh precisely what it should. Diastereomers do generally separate under reversed-phase conditions, so the wrong isomer usually appears as a distinct peak near the main one, which means the chromatogram is the instrument that catches this error and the mass result is not.

Where identity is reported as HPLC-RTM, retention-time matching against a properly characterised reference standard is doing exactly this work — provided the report names the standard it matched against.

What else the sequence predicts

Storage of the lyophilized solid

Supplied as a freeze-dried solid, governed by temperature and moisture. Strongly basic peptides are markedly hygroscopic, so equilibration to room temperature before opening a vial is worth observing.

Stability is a documented property rather than an assumed one: a laboratory establishes it by holding material under defined conditions and re-analysing at intervals. Where a retest date is stated, the question worth asking is what data supports it. See storing lyophilized research materials.

What the published literature covers

The research record is preclinical and clinical in parts, covering mitochondrial membrane interactions, cell-culture studies of mitochondrial function, and animal models. The alternating basic-aromatic motif described above is itself the subject of a substantial part of that literature, which is why the structure rather than the compound's effects is the substance of this page.

The compound has not completed the regulatory process that would establish safety or efficacy for any medical indication, and findings in animal models and cell culture do not transfer automatically to other species. Arctic Lab Supply does not publish research conclusions, recommend applications, or provide guidance on experimental design.

On Arctic Lab Supply reports. Every published report is listed in the batch COA library with its certificate number and verification link. The report for the lot you receive is the one that governs; where an earlier lot's figures differ, the lot-specific report is authoritative.

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